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Plan Szkolenia
Introduction to the Python programming language
- Why Python?
- Using Python to deal with biological data
- Working with the iPython shell
- Your first programme
- Writing Python scripts
- Importing modules
Working with protein and RNA/DNA sequences
- Finding motives
- Transcription and translation in silico
- Handling sequence alignments
Parsing data in different biological formats
- Parsing FASTA
- Data format conversions
Running biological analyses
- BLAST
- Accessing biological web services
Dealing with biological 3D structures using Python
Python facilitates statistical analysis
Visualizing data
- Creating bar and scatter plots
- Calculating an Area Under Curve (AUC)
Working with .xls and .csv files
- Importing data from and exporting to MS Excel / OpenOffice Calc
- Writing .xls and .csv files
Using Python to create an automated data processing pipeline
Wymagania
Basic biological knowledge about protein, RNA and DNA sequences.
28 godzin
Opinie uczestników (1)
The accesibilit of the trainer and the ability to communicate very effective,
